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1

Soil bacterial networks are less stable under drought than fungal networks

de Vries, Franciska T., Griffiths, Rob I., Bailey, Mark, Craig, Hayley, Girlanda, Mariangela, Gweon, Hyun Soon, Hallin, Sara, Kaisermann, Aurore, Keith, Aidan M., Kretzschmar, Marina, Lemanceau, Phili

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 3.23 MB

english, 2018

2

Exploiting ecosystem services in agriculture for increased food security

Bommarco, Riccardo, Vico, Giulia, Hallin, Sara

Journal:

Global Food Security

Year:

2018

Language:

english

File:

PDF, 339 KB

english, 2018

3

Two-stage anaerobic digestion for reduced hydrogen sulphide production

Moestedt, Jan, Nordell, Erik, Hallin, Sara, Schnürer, Anna

Journal:

Journal of Chemical Technology & Biotechnology

Year:

2015

Language:

english

File:

PDF, 846 KB

english, 2015

4

Archaeal Ammonia Oxidizers Dominate in Numbers, but Bacteria Drive Gross Nitrification in N-amended Grassland Soil

Sterngren, Anna E., Hallin, Sara, Bengtson, Per

Journal:

Frontiers in Microbiology

Year:

2015

Language:

english

File:

PDF, 897 KB

english, 2015

5

Agricultural diversification promotes multiple ecosystem services without compromising yield

Tamburini, Giovanni, Bommarco, Riccardo, Wanger, Thomas Cherico, Kremen, Claire, van der Heijden, Marcel G. A., Liebman, Matt, Hallin, Sara

Journal:

Science Advances

Year:

2020

File:

PDF, 312 KB

2020

6

Response of Induced Perturbation on Replicating β-Proteobacterial Ammonia-Oxidizing Populations in Soil

Karin A. Nyberg, Karin Enwall, Anna Schnürer, Ingvar Sundh, Sara Hallin

Journal:

Microbial Ecology

Year:

2012

Language:

english

File:

PDF, 320 KB

english, 2012

7

Soil microbial diversity: an ISO standard for soil DNA extraction

Laurent Philippot, Cristina Abbate, Antonio Bispo, Thierry Chesnot, Sara Hallin, Philippe Lemanceau, Kristina Lindström, Pascal Pandard, Esperanza Romero, Michael Schloter, Pascal Simonet, Kornelia Sm

Journal:

Journal of Soils and Sediments

Year:

2010

Language:

english

File:

PDF, 68 KB

english, 2010

8

Temporal changes in abundance and composition of ammonia-oxidizing bacterial and archaeal communities in a drained peat soil in relation to N2O emissions

Janet Andert, Ella Wessén, Gunnar Börjesson, Sara Hallin

Journal:

Journal of Soils and Sediments

Year:

2011

Language:

english

File:

PDF, 291 KB

english, 2011

9

Structure and function of denitrifying and nitrifying bacterial communities in relation to the plant species in a constructed wetland

Olaya Ruiz-Rueda, Sara Hallin, Lluis Bañeras

Journal:

FEMS Microbiology Ecology

Year:

2009

Language:

english

File:

PDF, 564 KB

english, 2009

10

Phenotypic and genotypic heterogeneity among closely related soil-borne N2- and N2O-producing Bacillus isolates harboring the nosZ gene

Christopher M. Jones, Allana Welsh, Ingela N. Throbäck, Peter Dörsch, Lars R. Bakken, Sara Hallin

Journal:

FEMS Microbiology Ecology

Year:

2011

Language:

english

File:

PDF, 336 KB

english, 2011

11

Silver (Ag+) reduces denitrification and induces enrichment of novel nirK genotypes in soil

Ingela Noredal Throbäck, Mats Johansson, Magnus Rosenquist, Mikael Pell, Mikael Hansson, Sara Hallin

Journal:

FEMS Microbiology Letters

Year:

2007

Language:

english

File:

PDF, 642 KB

english, 2007

12

Long-term impact of fertilization on activity and composition of bacterial communities and metabolic guilds in agricultural soil

Karin Enwall, Karin Nyberg, Stefan Bertilsson, Harald Cederlund, John Stenström, Sara Hallin

Journal:

Soil Biology and Biochemistry

Year:

2007

Language:

english

File:

PDF, 385 KB

english, 2007

13

Differential responses of bacterial and archaeal groups at high taxonomical ranks to soil management

Ella Wessén, Sara Hallin, Laurent Philippot

Journal:

Soil Biology and Biochemistry

Year:

2010

Language:

english

File:

PDF, 837 KB

english, 2010

14

Standardisation of methods in soil microbiology: progress and challenges

Laurent Philippot, Karl Ritz, Pascal Pandard, Sara Hallin, Fabrice Martin-Laurent

Journal:

FEMS Microbiology Ecology

Year:

2012

Language:

english

File:

PDF, 185 KB

english, 2012

15

Responses of bacterial and archaeal ammonia oxidizers to soil organic and fertilizer amendments under long-term management

Ella Wessén, Karin Nyberg, Janet K. Jansson, Sara Hallin

Journal:

Applied Soil Ecology

Year:

2010

Language:

english

File:

PDF, 412 KB

english, 2010

16

Abundance of archaeal and bacterial ammonia oxidizers – Possible bioindicator for soil monitoring

Ella Wessén, Sara Hallin

Journal:

Ecological Indicators

Year:

2011

Language:

english

File:

PDF, 138 KB

english, 2011

17

Soil carbon quality and nitrogen fertilization structure bacterial communities with predictable responses of major bacterial phyla

Cederlund, Harald, Wessén, Ella, Enwall, Karin, Jones, Christopher M., Juhanson, Jaanis, Pell, Mikael, Philippot, Laurent, Hallin, Sara

Journal:

Applied Soil Ecology

Year:

2014

Language:

english

File:

PDF, 801 KB

english, 2014

18

Recently identified microbial guild mediates soil N2O sink capacity

Jones, Christopher M., Spor, Ayme, Brennan, Fiona P., Breuil, Marie-Christine, Bru, David, Lemanceau, Philippe, Griffiths, Bryan, Hallin, Sara, Philippot, Laurent

Journal:

Nature Climate Change

Year:

2014

Language:

english

File:

PDF, 1.50 MB

english, 2014

19

Response of Induced Perturbation on Replicating ß-Proteobacterial Ammonia-Oxidizing Populations in Soil

Karin A. Nyberg, Karin Enwall, Anna Schnürer, Ingvar Sundh and Sara Hallin

Journal:

Microbial Ecology

Year:

2012

Language:

english

File:

PDF, 1.68 MB

english, 2012

20

Intercropping affects genetic potential for inorganic nitrogen cycling by root-associated microorganisms in Medicago sativa and Dactylis glomerata

Zhao, Ming, Jones, Christopher M., Meijer, Johan, Lundquist, Per-Olof, Fransson, Petra, Carlsson, Georg, Hallin, Sara

Journal:

Applied Soil Ecology

Year:

2017

Language:

english

File:

PDF, 401 KB

english, 2017

21

Relative abundance of denitrifying and DNRA bacteria and their activity determine nitrogen retention or loss in agricultural soil

Putz, Martina, Schleusner, Philipp, Rütting, Tobias, Hallin, Sara

Journal:

Soil Biology and Biochemistry

Year:

2018

Language:

english

File:

PDF, 527 KB

english, 2018

22

Soil Functional Operating Range Linked to Microbial Biodiversity and Community Composition Using Denitrifiers as Model Guild

Hallin, Sara, Welsh, Allana, Stenström, John, Hallet, Stephanie, Enwall, Karin, Bru, David, Philippot, Laurent, Kytöviita, Minna-Maarit

Journal:

Year:

2012

Language:

english

File:

PDF, 312 KB

english, 2012

23

nir geneâbased coâoccurrence patterns reveal assembly mechanisms of soil denitrifiers in response to fire

Goberna, Marta, Donat, Santiago, PÃ©rezâValera, Eduardo, Hallin, Sara, VerdÃº, Miguel

Journal:

Environmental Microbiology

Year:

2020

File:

PDF, 1.90 MB

2020

24

Carbon and nitrogen cycling in Yedoma permafrost controlled by microbial functional limitations

Monteux, Sylvain, Keuper, Frida, Fontaine, SÃ©bastien, Gavazov, Konstantin, Hallin, Sara, Juhanson, Jaanis, Krab, Eveline J., Revaillot, Sandrine, Verbruggen, Erik, Walz, Josefine, Weedon, James T., D

Journal:

Nature Geoscience

Year:

2020

File:

PDF, 3.04 MB

2020

25

Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE

Ingela Noredal Throbäck, Karin Enwall, Åsa Jarvis, Sara Hallin

Journal:

FEMS Microbiology Ecology

Year:

2004

Language:

english

File:

PDF, 987 KB

english, 2004

26

Ammonia-oxidizing communities in agricultural soil incubated with organic waste residues

Karin Nyberg, Anna Schnürer, Ingvar Sundh, Åsa Jarvis, Sara Hallin

Journal:

Biology and Fertility of Soils

Year:

2006

Language:

english

File:

PDF, 172 KB

english, 2006

27

Bacterial community diversity in paper mills processing recycled paper

Ulf Granhall, Allana Welsh, Ingela Noredal Throbäck, Karin Hjort, Mikael Hansson, Sara Hallin

Journal:

Journal of Industrial Microbiology & Biotechnology

Year:

2010

Language:

english

File:

PDF, 376 KB

english, 2010

28

Importance of denitrifiers lacking the genes encoding the nitrous oxide reductase for N2O emissions from soil

LAURENT PHILIPPOT, JANET ANDERT, CHRISTOPHER M. JONES, DAVID BRU, SARA HALLIN

Journal:

Global Change Biology

Year:

2011

Language:

english

File:

PDF, 212 KB

english, 2011

29

Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree

Laurent Philippot, David Bru, Nicolas P. A. Saby, Jiří Čuhel, Dominique Arrouays, Miloslav Šimek, Sara Hallin

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 2.34 MB

english, 2009

30

Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment

Hallin, Sara, Jones, Christopher M, Schloter, Michael, Philippot, Laurent

Journal:

The ISME Journal

Year:

2009

Language:

english

File:

PDF, 216 KB

english, 2009

31

Ecological and evolutionary factors underlying global and local assembly of denitrifier communities

Jones, Christopher M, Hallin, Sara

Journal:

The ISME Journal

Year:

2010

Language:

english

File:

PDF, 417 KB

english, 2010

32

Spatial distribution of ammonia-oxidizing bacteria and archaea across a 44-hectare farm related to ecosystem functioning

Wessén, Ella, Söderström, Mats, Stenberg, Maria, Bru, David, Hellman, Maria, Welsh, Allana, Thomsen, Frida, Klemedtson, Leif, Philippot, Laurent, Hallin, Sara

Journal:

The ISME Journal

Year:

2011

Language:

english

File:

PDF, 723 KB

english, 2011

33

The ecological coherence of high bacterial taxonomic ranks

Philippot, Laurent, Andersson, Siv G. E., Battin, Tom J., Prosser, James I., Schimel, Joshua P., Whitman, William B., Hallin, Sara

Journal:

Nature Reviews Microbiology

Year:

2010

Language:

english

File:

PDF, 873 KB

english, 2010

34

Intermittent dosage of ethanol in a pre-denitrifying activated sludge process

Serena Hasselblad, Sara Hallin

Journal:

Water Science and Technology

Year:

1996

Language:

english

File:

PDF, 357 KB

english, 1996

35

Knowledge gaps in soil carbon and nitrogen interactions – From molecular to global scale

Annemieke I. Gärdenäs, Göran I. Ågren, Jeffrey A. Bird, Marianne Clarholm, Sara Hallin, Phil Ineson, Thomas Kätterer, Heike Knicker, S. Ingvar Nilsson, Torgny Näsholm, Stephen Ogle, Keith Paustian, Tr

Journal:

Soil Biology and Biochemistry

Year:

2011

Language:

english

File:

PDF, 452 KB

english, 2011

36

Bacterial structure of biofilms in wastewater infiltration systems

Mikael Pell, Bo Stenberg, Sara Hallin

Journal:

Water Science and Technology

Year:

1998

Language:

english

File:

PDF, 651 KB

english, 1998

37

Adaptation of denitrifying bacteria to acetate and methanol in activated sludge

Sara Hallin, Maria Rothman, Mikael Pell

Journal:

Year:

1996

Language:

english

File:

PDF, 599 KB

english, 1996

38

Finding the missing link between diversity and activity using denitrifying bacteria as a model functional community

Laurent Philippot, Sara Hallin

Journal:

Current Opinion in Microbiology

Year:

2005

Language:

english

File:

PDF, 401 KB

english, 2005

39

Survey of bromodeoxyuridine uptake among environmental bacteria and variation in uptake rates in a taxonomically diverse set of bacterial isolates

Maria Hellman, Jeanette Berg, Kristian K. Brandt, Sara Hallin

Journal:

Journal of Microbiological Methods

Year:

2011

Language:

english

File:

PDF, 259 KB

english, 2011

40

Towards food, feed and energy crops mitigating climate change

Laurent Philippot, Sara Hallin

Journal:

Trends in Plant Science

Year:

2011

Language:

english

File:

PDF, 310 KB

english, 2011

41

Spatial variations in denitrification activity in wetland sediments explained by hydrology and denitrifying community structure

Johan Kjellin, Sara Hallin, Anders Wörman

Journal:

Year:

2007

Language:

english

File:

PDF, 631 KB

english, 2007

42

Genetic potential for N2O emissions from the sediment of a free water surface constructed wetland

Arantzazu García-Lledó, Ariadna Vilar-Sanz, Rosalia Trias, Sara Hallin, Lluís Bañeras

Journal:

Year:

2011

Language:

english

File:

PDF, 866 KB

english, 2011

43

METABOLIC PROPERTIES OF DENITRIFYING BACTERIA ADAPTING TO METHANOL AND ETHANOL IN ACTIVATED SLUDGE

SARA HALLIN, MIKAEL PELL

Journal:

Year:

1998

Language:

english

File:

PDF, 1.36 MB

english, 1998

44

Temporal Changes in Methane Oxidizing and Denitrifying Communities and Their Activities in a Drained Peat Soil

Janet Andert, Gunnar Börjesson, Sara Hallin

Journal:

Year:

2012

Language:

english

File:

PDF, 296 KB

english, 2012

45

The unaccounted yet abundant nitrous oxide-reducing microbial community: a potential nitrous oxide sink

Jones, Christopher M, Graf, Daniel RH, Bru, David, Philippot, Laurent, Hallin, Sara

Journal:

The ISME Journal

Year:

2013

Language:

english

File:

PDF, 748 KB

english, 2013

46

Abundance, activity and structure of denitrifier communities in phototrophic river biofilms (River Garonne, France)

Lyautey, Emilie, Hallin, Sara, Teissier, Samuel, Iribar, Amaia, Compin, Arthur, Philippot, Laurent, Garabetian, Frédéric

Journal:

Year:

2013

Language:

english

File:

PDF, 344 KB

english, 2013

47

Nitrogen removal and spatial distribution of denitrifier and anammox communities in a bioreactor for mine drainage treatment

Herbert, Roger B., Winbjörk, Harry, Hellman, Maria, Hallin, Sara

Journal:

Year:

2014

Language:

english

File:

PDF, 1.29 MB

english, 2014

48

Brassicaceae cover crops reduce Aphanomyces pea root rot without suppressing genetic potential of microbial nitrogen cycling

Hossain, Shakhawat, Bergkvist, Göran, Glinwood, Robert, Berglund, Kerstin, Mårtensson, Anna, Hallin, Sara, Persson, Paula

Journal:

Year:

2015

Language:

english

File:

PDF, 360 KB

english, 2015

49

Potential denitrification rates are spatially linked to colonization patterns of nosZ genotypes in an alluvial wetland

Iribar, Amaia, Hallin, Sara, Pérez, Jose Miguel Sánchez, Enwall, Karin, Poulet, Nicolas, Garabétian, Frédéric

Journal:

Ecological Engineering

Year:

2015

Language:

english

File:

PDF, 1002 KB

english, 2015

50

Biology of the Nitrogen Cycle || Molecular Tools to Assess the Diversity and Density of Denitrifying Bacteria in Their Habitats

Year:

2007

Language:

english

File:

PDF, 215 KB

english, 2007